TY - JOUR
T1 - Artificial intelligence for diagnosis of mild-moderate COVID-19 using haematological markers
AU - Chadaga, Krishnaraj
AU - Prabhu, Srikanth
AU - Bhat, Vivekananda
AU - Sampathila, Niranjana
AU - Umakanth, Shashikiran
AU - Chadaga, Rajagopala
N1 - Funding Information:
No funding was received. We would like to thank Manipal Academy of Higher Education for giving us a platform to conduct this study. We would also like to thank Varada Vivek Khanna for proof-reading this paper and giving her valuable insights.
Publisher Copyright:
© 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.
PY - 2023/12/1
Y1 - 2023/12/1
N2 - OBJECTIVE: The persistent spread of SARS-CoV-2 makes diagnosis challenging because COVID-19 symptoms are hard to differentiate from those of other respiratory illnesses. The reverse transcription-polymerase chain reaction test is the current golden standard for diagnosing various respiratory diseases, including COVID-19. However, this standard diagnostic method is prone to erroneous and false negative results (10% -15%). Therefore, finding an alternative technique to validate the RT-PCR test is paramount. Artificial intelligence (AI) and machine learning (ML) applications are extensively used in medical research. Hence, this study focused on developing a decision support system using AI to diagnose mild-moderate COVID-19 from other similar diseases using demographic and clinical markers. Severe COVID-19 cases were not considered in this study since fatality rates have dropped considerably after introducing COVID-19 vaccines. METHODS: A custom stacked ensemble model consisting of various heterogeneous algorithms has been utilized for prediction. Four deep learning algorithms have also been tested and compared, such as one-dimensional convolutional neural networks, long short-term memory networks, deep neural networks and Residual Multi-Layer Perceptron. Five explainers, namely, Shapley Additive Values, Eli5, QLattice, Anchor and Local Interpretable Model-agnostic Explanations, have been utilized to interpret the predictions made by the classifiers. RESULTS: After using Pearson's correlation and particle swarm optimization feature selection, the final stack obtained a maximum accuracy of 89%. The most important markers which were useful in COVID-19 diagnosis are Eosinophil, Albumin, T. Bilirubin, ALP, ALT, AST, HbA1c and TWBC. CONCLUSION: The promising results suggest using this decision support system to diagnose COVID-19 from other similar respiratory illnesses.
AB - OBJECTIVE: The persistent spread of SARS-CoV-2 makes diagnosis challenging because COVID-19 symptoms are hard to differentiate from those of other respiratory illnesses. The reverse transcription-polymerase chain reaction test is the current golden standard for diagnosing various respiratory diseases, including COVID-19. However, this standard diagnostic method is prone to erroneous and false negative results (10% -15%). Therefore, finding an alternative technique to validate the RT-PCR test is paramount. Artificial intelligence (AI) and machine learning (ML) applications are extensively used in medical research. Hence, this study focused on developing a decision support system using AI to diagnose mild-moderate COVID-19 from other similar diseases using demographic and clinical markers. Severe COVID-19 cases were not considered in this study since fatality rates have dropped considerably after introducing COVID-19 vaccines. METHODS: A custom stacked ensemble model consisting of various heterogeneous algorithms has been utilized for prediction. Four deep learning algorithms have also been tested and compared, such as one-dimensional convolutional neural networks, long short-term memory networks, deep neural networks and Residual Multi-Layer Perceptron. Five explainers, namely, Shapley Additive Values, Eli5, QLattice, Anchor and Local Interpretable Model-agnostic Explanations, have been utilized to interpret the predictions made by the classifiers. RESULTS: After using Pearson's correlation and particle swarm optimization feature selection, the final stack obtained a maximum accuracy of 89%. The most important markers which were useful in COVID-19 diagnosis are Eosinophil, Albumin, T. Bilirubin, ALP, ALT, AST, HbA1c and TWBC. CONCLUSION: The promising results suggest using this decision support system to diagnose COVID-19 from other similar respiratory illnesses.
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U2 - 10.1080/07853890.2023.2233541
DO - 10.1080/07853890.2023.2233541
M3 - Article
C2 - 37436038
AN - SCOPUS:85164625577
SN - 0785-3890
VL - 55
SP - 2233541
JO - Annals of Medicine
JF - Annals of Medicine
IS - 1
M1 - 2233541
ER -