TY - GEN
T1 - Grading of mammalian cumulus oocyte complexes using machine learning for in vitro embryo culture
AU - Viswanath, P. S.
AU - Weiser, Tobias
AU - Chintala, Phalgun
AU - Mandal, Subhamoy
AU - Dutta, Rahul
N1 - Publisher Copyright:
©.
PY - 2016/4/18
Y1 - 2016/4/18
N2 - Visual observation of Cumulus Oocyte Complexes provides only limited information about its functional competence, whereas the molecular evaluations methods are cumbersome or costly. Image analysis of mammalian oocytes can provide attractive alternative to address this challenge. However, it is complex, given the huge number of oocytes under inspection, subjective nature of the features inspected for identification. Supervised machine learning methods like random forest with annotations from expert biologists can make the analysis task standardized and reduces inter-subject variability. We present a semiautomatic framework for predicting the class an oocyte belongs to, based on multi-object parametric segmentation on the acquired microscopic image followed by a feature based classification using random forests.
AB - Visual observation of Cumulus Oocyte Complexes provides only limited information about its functional competence, whereas the molecular evaluations methods are cumbersome or costly. Image analysis of mammalian oocytes can provide attractive alternative to address this challenge. However, it is complex, given the huge number of oocytes under inspection, subjective nature of the features inspected for identification. Supervised machine learning methods like random forest with annotations from expert biologists can make the analysis task standardized and reduces inter-subject variability. We present a semiautomatic framework for predicting the class an oocyte belongs to, based on multi-object parametric segmentation on the acquired microscopic image followed by a feature based classification using random forests.
UR - https://www.scopus.com/pages/publications/84968611433
UR - https://www.scopus.com/pages/publications/84968611433#tab=citedBy
U2 - 10.1109/BHI.2016.7455862
DO - 10.1109/BHI.2016.7455862
M3 - Conference contribution
AN - SCOPUS:84968611433
T3 - 3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016
SP - 172
EP - 175
BT - 3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016
PB - Institute of Electrical and Electronics Engineers Inc.
T2 - 3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016
Y2 - 24 February 2016 through 27 February 2016
ER -