Grading of mammalian cumulus oocyte complexes using machine learning for in vitro embryo culture

  • P. S. Viswanath
  • , Tobias Weiser
  • , Phalgun Chintala
  • , Subhamoy Mandal
  • , Rahul Dutta

Research output: Chapter in Book/Report/Conference proceedingConference contribution

12 Citations (Scopus)

Abstract

Visual observation of Cumulus Oocyte Complexes provides only limited information about its functional competence, whereas the molecular evaluations methods are cumbersome or costly. Image analysis of mammalian oocytes can provide attractive alternative to address this challenge. However, it is complex, given the huge number of oocytes under inspection, subjective nature of the features inspected for identification. Supervised machine learning methods like random forest with annotations from expert biologists can make the analysis task standardized and reduces inter-subject variability. We present a semiautomatic framework for predicting the class an oocyte belongs to, based on multi-object parametric segmentation on the acquired microscopic image followed by a feature based classification using random forests.

Original languageEnglish
Title of host publication3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages172-175
Number of pages4
ISBN (Electronic)9781509024551
DOIs
Publication statusPublished - 18-04-2016
Event3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016 - Las Vegas, United States
Duration: 24-02-201627-02-2016

Publication series

Name3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016

Conference

Conference3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016
Country/TerritoryUnited States
CityLas Vegas
Period24-02-1627-02-16

All Science Journal Classification (ASJC) codes

  • Health Informatics
  • Health Information Management

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